About Me

🎓 Education

• M.S., Artificial Intelligence, Wuhan University
  • From Sep. 2023 to Jun. 2026
  • GPA: 3.69/4.00
  • Research Interest: AI for Life Science, Agent
  • Supervisor: Prof. Yong Luo, Prof. Kehua Su and Prof. Bo Du
• B.S., Software Engineering, Northeastern University (CN)
  • From Sep. 2019 to Jun. 2023
  • GPA: 4.23/5.00 (Top 1%)
  • Research Interest: Multimodal Learning, NILM (Non-Intrusive Load Monitoring)
  • Supervisor: Prof. Zhuofu Deng

💼 Experience

• Summer & Fall 2025, Intern
  • Tencent, AI for Life Science Lab
  • Mentor: Dr. Biaobin Jiang
• Spring & Summer 2025, Intern
  • Microsoft Research Asia (MSRA), AI4Science Group
  • Mentor: Dr. Ran Bi
• Spring & Summer 2023, Intern
  • BioGeometry
  • Mentor: Dr. Huiyu Cai
• Summer 2022, Intern
  • HUAWEI Ascend

📝 Publications (* indicates equal contribution)

PDAgent: An LLM-Driven Autonomous Agent Framework Towards In Silico Protein Design via Directed Mutation
Song Ouyang, Zhijie Dong, Yong Luo, Kehua Su, Huangxuan Zhao, Miaojing Shi, Bo Du
43rd International Conference on Machine Learning (ICML 2026)
[Paper] [Code] [Slides]

M³Site: Multi-Class Multi-Modal Learning for Protein Active Site Identification and Classification
Song Ouyang, Yong Luo, Huiyu Cai, Kehua Su, Fei Liao, Na Zhan, Huangxuan Zhao, Tailang Yin, Lin Zhao, Dongjing Shan
Briefings in Bioinformatics
[Paper] [Code]

Anatomy-Conserving Unpaired CBCT-to-CT Translation via Schrödinger Bridge
Ke Shi*, Song Ouyang*, Gang Liu*, Yong Luo, Kehua Su, Zhiwen Liang, Bo Du
28th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2025) (Early Accept)
[Paper] [Code]

MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins
Song Ouyang, Huiyu Cai, Yong Luo, Kehua Su, Lefei Zhang, Bo Du
38th Annual Conference on Neural Information Processing Systems (NeurIPS 2024)
[Paper] [Code] [Slides]

🔨 Projects

• GeoBiologics, a generative AI-powered one-stop platform for antibody design.
• MindSpore-MAE, a re-implementation of Masked Autoencoders Are Scalable Vision Learners in MindSpore.

🏅 Selected Honors

• Awards
  • [Jun. 2026] Outstanding Graduate of WHU (Top 10%)
  • [Oct. 2025] National Scholarship for Postgraduates (Top 1%)
  • [Oct. 2025] First-Class Scholarship of WHU (Top 2%)
  • [Oct. 2025] Outstanding Graduate Student of WHU (Top 20%)
  • [Nov. 2024] Second-Class Scholarship of WHU (Top 12%)
  • [Nov. 2024] Outstanding Graduate Student of WHU (Top 20%)
  • [Nov. 2023] First-Class Scholarship for Outstanding Freshmen (Top 10%)
  • [Jun. 2023] Student Model Award of Software College (Top 0.25%)
  • [Jun. 2023] Outstanding Graduate of Liaoning Province (Top 3%)
  • [May. 2023] Outstanding University Student of Shenyang City (Only 1)
  • [Mar. 2023] First-Class Scholarship of NEU (Top 2%)
  • [Dec. 2022] National Scholarship (Top 1%)
  • [Dec. 2022] Outstanding Student Model Award of NEU (Top 1%)
  • [Sep. 2022] First-Class Scholarship of NEU (Top 2%)
  • [Dec. 2021] Xianggangyucai First-Class Scholarship of NEU (Only 1)
  • [Dec. 2021] Outstanding Student Cadre Model of NEU (Top 1%)
  • [Sep. 2021] First-Class Scholarship of NEU (Top 2%)
  • [Dec. 2020] National Scholarship (Top 1%)
  • [Dec. 2020] Outstanding Student Model of NEU (Top 1%)
  • [Oct. 2020] First-Class Scholarship of NEU (Top 2%)
• Competitions (* indicates that I am the team leader)
  • [Nov. 2024] National Second Prize of China Post-Graduate Mathematical Contest in Modeling (CPMCM)* (Top 1 in WHU)
  • [Dec. 2023] National Excellence Award of Chinese Artificial Intelligence Application Scenario Innovation Challenge
  • [Jul. 2022] National Bronze Award of National College Student Algorithm Design and Programming Challenge*
  • [Jun. 2022] National Second Prize of Lanqiao Cup National Software and Information Technology Professional Talent Competition
  • [Jul. 2021] National Third Prize of China College Student Computer Design Competition*
  • [Apr. 2021] Honorable Mention of Mathematical Contest in Modeling (MCM)*

📌 Academic Service

• Reviewer
  • International Conference on Machine Learning (ICML), 2026
  • ACM SIGKDD Conference on Knowledge Discovery and Data Mining (SIGKDD), 2026
  • International Joint Conference on Artificial Intelligence (IJCAI), 2026
  • Annual Conference on Neural Information Processing Systems (NeurIPS), 2025
  • International Conference on Machine Learning (ICML), 2025
  • International Conference on Pattern Recognition (ICPR), 2024
  • ACM Transactions on Knowledge Discovery from Data (TKDD), 2023
• Membership
  • IEEE Membership
  • IEEE Young Professionals
  • IEEE Geoscience and Remote Sensing Society Membership

👉 Skills

• PyTorch (Lightning)
• MindSpore
• …